STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9X2M9CPSF_A domain-containing protein. (1233 aa)    
Predicted Functional Partners:
A0A4P9WXC2
DUF382-domain-containing protein.
   
 0.999
A0A4P9X2S4
SF3b1 domain-containing protein.
   
 0.999
A0A4P9X761
RNA-binding domain-containing protein.
    
 0.999
A0A4P9XA98
Uncharacterized protein.
   
 0.999
A0A4P9XAP7
Uncharacterized protein.
   
 0.997
A0A4V1ITX3
Splicing factor 3B subunit 5/RDS3 complex subunit 10.
   
 0.997
A0A4P9X4U3
C2H2-type domain-containing protein.
   
 0.995
A0A4P9X7R2
Uncharacterized protein.
    
 0.995
A0A4V1IUK3
Matrin-type domain-containing protein.
   
 0.995
A0A4P9X3G7
Uncharacterized protein.
   
 
 0.994
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.