STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9X2S6ThiF domain-containing protein. (340 aa)    
Predicted Functional Partners:
A0A4P9X286
E2_bind domain-containing protein.
   
 0.999
A0A4P9WVS4
Clavaminate synthase-like protein.
    
 0.982
A0A4P9X3B5
Ubiquitin-like domain-containing protein.
    
 0.977
A0A4V1IUF8
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.962
A0A4P9WPK3
Autophagy-related protein.
   
 0.822
A0A4P9XAQ9
Ubiquitin-like domain-containing protein.
   
 0.815
A0A4P9XEX8
Autophagy-related protein 3.
    
 0.815
A0A4P9XC20
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
    
 0.795
A0A4P9X2L2
UBIQUITIN_CONJUGAT_2 domain-containing protein.
 
  
 0.788
A0A4P9X711
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
 
  
   0.760
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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