STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9X2W7Uncharacterized protein. (411 aa)    
Predicted Functional Partners:
A0A4P9XA71
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.859
A0A4P9XC69
Uncharacterized protein.
   
 0.856
A0A4P9WX86
Uncharacterized protein.
    
 0.848
A0A4P9WX92
DNA-directed RNA polymerase I.
    
 0.848
A0A4P9WZB8
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.848
A0A4P9X001
Uncharacterized protein.
    
 0.848
A0A4P9X1A9
Uncharacterized protein.
    
 0.848
A0A4P9X3R6
RNA polymerase Rpb6.
    
 0.848
A0A4P9X8R0
RPOL4c domain-containing protein.
    
 0.848
A0A4P9XDE8
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
 0.848
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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