STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9X485Uncharacterized protein. (786 aa)    
Predicted Functional Partners:
A0A4P9XB17
TAFII28 domain-containing protein.
    
 0.687
A0A4P9XD24
Uncharacterized protein.
    
 0.667
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 0.632
A0A4P9X4W4
SCA7 domain-containing protein.
    
 0.609
A0A4P9XCG3
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.589
A0A4P9XDL2
Uridine kinase; Belongs to the uridine kinase family.
    
 0.588
A0A4P9XGB6
Uncharacterized protein.
    
 0.588
A0A4V1IV30
PRK domain-containing protein.
    
 0.588
A0A4P9X3F8
Guanylate kinase-like domain-containing protein.
    
 0.577
A0A4P9X3F4
Uncharacterized protein.
    
 0.576
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.