STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9X4E5RING-type domain-containing protein. (156 aa)    
Predicted Functional Partners:
A0A4P9XET6
Uncharacterized protein.
    
 
 0.938
A0A4P9X9M3
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 0.740
A0A4P9X5Q9
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
    
 
 0.687
A0A4V1IUR9
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
    
   0.686
A0A4P9XCW6
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.669
A0A4P9X381
Ribosomal protein L6.
   
   0.660
A0A4P9X5X4
HECT-domain-containing protein.
   
 0.658
A0A4P9XB53
Ribosomal protein L2.
    
   0.652
A0A4P9XFH7
Uncharacterized protein.
    
   0.643
A0A4P9XF59
Uncharacterized protein.
    
  0.633
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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