STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9X4W4SCA7 domain-containing protein. (657 aa)    
Predicted Functional Partners:
A0A4P9X5K5
Bromo domain-containing protein.
    
 0.997
CXG81DRAFT_485
Transcription factor TAFII-31.
    
 0.996
A0A4P9X066
TAF domain-containing protein.
   
 0.996
A0A4P9XBQ2
Ubiquitin carboxyl-terminal hydrolase.
    
 0.996
A0A4P9X5R7
Uncharacterized protein.
    
 0.995
A0A4P9XCG3
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.995
A0A4P9X699
WD_REPEATS_REGION domain-containing protein.
    
 0.993
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 0.991
A0A4P9XB17
TAFII28 domain-containing protein.
    
 0.990
A0A4P9XEU7
TFIID_20kDa domain-containing protein.
   
 0.990
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.