STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9X5M8Uncharacterized protein. (744 aa)    
Predicted Functional Partners:
A0A4P9XFT6
Uncharacterized protein.
    
 0.856
A0A4P9X4A8
Small nuclear ribonucleoprotein Sm D2.
    
 0.728
A0A4P9X463
Small nuclear ribonucleoprotein Sm D3.
    
 0.727
A0A4P9X4S6
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.719
A0A4P9XDT7
Sm domain-containing protein.
    
  0.718
A0A4V1IUH7
Uncharacterized protein.
    
 0.715
A0A4P9X1C6
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.714
A0A4P9X5U7
Small nuclear ribonucleoprotein G.
    
  0.713
A0A4P9XA79
Uncharacterized protein.
    
 0.684
A0A4P9XC79
Uncharacterized protein.
    
 0.684
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
Server load: low (28%) [HD]