STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9X721U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (255 aa)    
Predicted Functional Partners:
A0A4P9X1Z5
PINc domain-containing protein.
   
 0.999
A0A4P9X281
DRIM domain-containing protein.
   
 0.999
A0A4P9X4J2
WD40 repeat-like protein.
   
  0.999
A0A4P9X5A7
WD_REPEATS_REGION domain-containing protein.
   
 0.999
A0A4P9X6A6
CBF domain-containing protein.
   
  0.999
A0A4P9X6C3
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
A0A4V1IUP9
Sas10 domain-containing protein.
   
 0.999
A0A4V1IVI8
Uncharacterized protein.
   
 0.999
A0A4P9X0D7
Nep1-domain-containing protein.
   
 0.998
A0A4P9XE22
S4 RNA-binding domain-containing protein.
   
  0.998
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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