STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9X8A7Uncharacterized protein. (1341 aa)    
Predicted Functional Partners:
A0A4V1IU96
Spindle pole body component.
    
 0.800
A0A4P9X9V3
Uncharacterized protein.
   
 0.743
A0A4P9X766
Spindle pole body component.
    
 0.707
A0A4V1IUX3
Spindle pole body component.
    
 0.701
A0A4P9WUQ0
Tubulin nucleotide-binding domain-like protein; Belongs to the tubulin family.
   
 0.686
A0A4P9XB23
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.686
A0A4P9X632
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.657
A0A4P9WWM6
Histone H2B; Belongs to the histone H2B family.
    
 0.631
A0A4P9X641
Histone H3.2.
    
 0.629
A0A4P9X844
Histone domain-containing protein.
    
 0.629
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.