STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XBA5Uncharacterized protein. (639 aa)    
Predicted Functional Partners:
A0A4P9X4H0
Uncharacterized protein.
   
 
 0.998
A0A4P9X3T1
Brix domain-containing protein.
   
 
 0.990
A0A4P9X8I8
CP-type G domain-containing protein.
   
 
 0.990
A0A4P9WXQ4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.989
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.989
A0A4P9XC95
NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.989
A0A4P9XCL7
RRM domain-containing protein.
   
 
 0.986
A0A4P9X552
Protein MAK16; Belongs to the MAK16 family.
   
 
 0.985
A0A4V1IUQ6
WD_REPEATS_REGION domain-containing protein.
   
 
 0.976
CXG81DRAFT_50
FtsJ-domain-containing protein.
   
 
 0.974
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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