STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XDU5Uncharacterized protein. (720 aa)    
Predicted Functional Partners:
A0A4P9XEY1
BRCT domain-containing protein.
   
 0.832
A0A4P9X8I8
CP-type G domain-containing protein.
  
 0.788
A0A4P9X5R3
Uncharacterized protein.
   
 0.786
A0A4P9X1J0
Uncharacterized protein.
    
 0.760
A0A4P9X7Z7
Uncharacterized protein.
  
 0.759
A0A4P9X2S4
SF3b1 domain-containing protein.
   
 0.756
A0A4P9X6C3
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.755
A0A4V1IUQ6
WD_REPEATS_REGION domain-containing protein.
   
 0.748
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.745
A0A4P9XEG9
Uncharacterized protein.
   
 0.745
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.