STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XE86CID domain-containing protein. (281 aa)    
Predicted Functional Partners:
A0A4P9X746
Uncharacterized protein.
   
 
 0.874
A0A4V1IU77
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.853
A0A4P9X393
mRNA cap 0 methyltransferase domain-containing protein.
   
 
 0.661
A0A4P9WUC7
Nuclear cap-binding protein subunit 2.
   
 
 0.650
A0A4V1IUE8
Nucleotidyltransferase.
    
 
 0.648
A0A4P9X3I9
Uncharacterized protein.
   
 
 0.633
A0A4P9XF57
HRDC domain-containing protein.
   
 
 0.581
A0A4P9XA71
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.575
A0A4P9X6N0
CID domain-containing protein.
   
 
 0.543
A0A4P9XET7
RPOLD domain-containing protein.
   
 
 0.517
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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