STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9XFH0Uncharacterized protein. (1056 aa)    
Predicted Functional Partners:
A0A4P9XFT6
Uncharacterized protein.
    
 0.883
A0A4V1ITB7
WD40 repeat-like protein.
   
 0.669
A0A4P9XEY1
BRCT domain-containing protein.
   
 0.637
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.605
A0A4P9X9S8
Uncharacterized protein.
    
 0.604
A0A4P9X0K6
Putative 40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.601
A0A4P9WX98
Putative transcription activator snf2l1.
    
  0.598
A0A4P9XEB1
Uncharacterized protein.
    
 0.594
A0A4P9XAX6
Uncharacterized protein.
    
  0.591
A0A4P9WXV2
Uncharacterized protein.
    
 0.590
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.