Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG67723.1 | OJG68826.1 | RV09_GL002492 | RV09_GL000225 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosomal protein S1. | 0.855 |
OJG67723.1 | OJG69159.1 | RV09_GL002492 | RV09_GL000558 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Riboflavin biosynthesis protein RibF; Belongs to the ribF family. | 0.418 |
OJG67723.1 | guaA | RV09_GL002492 | RV09_GL001459 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.764 |
OJG67723.1 | nusA | RV09_GL002492 | RV09_GL000565 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.875 |
OJG67723.1 | rbfA | RV09_GL002492 | RV09_GL000562 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.647 |
OJG67723.1 | rimP | RV09_GL002492 | RV09_GL000566 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.672 |
OJG67723.1 | truB | RV09_GL002492 | RV09_GL000559 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA pseudouridine(55) synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.879 |
OJG68505.1 | OJG68826.1 | RV09_GL001752 | RV09_GL000225 | Hypothetical protein. | Ribosomal protein S1. | 0.633 |
OJG68505.1 | guaA | RV09_GL001752 | RV09_GL001459 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.740 |
OJG68505.1 | nusA | RV09_GL001752 | RV09_GL000565 | Hypothetical protein. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.757 |
OJG68505.1 | rbfA | RV09_GL001752 | RV09_GL000562 | Hypothetical protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.757 |
OJG68505.1 | rimP | RV09_GL001752 | RV09_GL000566 | Hypothetical protein. | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.620 |
OJG68505.1 | truB | RV09_GL001752 | RV09_GL000559 | Hypothetical protein. | tRNA pseudouridine(55) synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.874 |
OJG68826.1 | OJG67723.1 | RV09_GL000225 | RV09_GL002492 | Ribosomal protein S1. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.855 |
OJG68826.1 | OJG68505.1 | RV09_GL000225 | RV09_GL001752 | Ribosomal protein S1. | Hypothetical protein. | 0.633 |
OJG68826.1 | guaA | RV09_GL000225 | RV09_GL001459 | Ribosomal protein S1. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.738 |
OJG68826.1 | infB | RV09_GL000225 | RV09_GL000563 | Ribosomal protein S1. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.633 |
OJG68826.1 | nusA | RV09_GL000225 | RV09_GL000565 | Ribosomal protein S1. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.839 |
OJG68826.1 | truB | RV09_GL000225 | RV09_GL000559 | Ribosomal protein S1. | tRNA pseudouridine(55) synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.832 |
OJG69159.1 | OJG67723.1 | RV09_GL000558 | RV09_GL002492 | Riboflavin biosynthesis protein RibF; Belongs to the ribF family. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.418 |
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