Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG69055.1 | OJG69255.1 | RV09_GL000454 | RV09_GL000654 | Metallo-beta-lactamase. | Helicase. | 0.667 |
OJG69055.1 | OJG69318.1 | RV09_GL000454 | RV09_GL000717 | Metallo-beta-lactamase. | Toxin secretion/phage lysis holin. | 0.511 |
OJG69255.1 | OJG69055.1 | RV09_GL000654 | RV09_GL000454 | Helicase. | Metallo-beta-lactamase. | 0.667 |
OJG69255.1 | OJG69318.1 | RV09_GL000654 | RV09_GL000717 | Helicase. | Toxin secretion/phage lysis holin. | 0.667 |
OJG69318.1 | OJG69055.1 | RV09_GL000717 | RV09_GL000454 | Toxin secretion/phage lysis holin. | Metallo-beta-lactamase. | 0.511 |
OJG69318.1 | OJG69255.1 | RV09_GL000717 | RV09_GL000654 | Toxin secretion/phage lysis holin. | Helicase. | 0.667 |
OJG69318.1 | OJG69319.1 | RV09_GL000717 | RV09_GL000718 | Toxin secretion/phage lysis holin. | ArpU family phage transcriptional regulator. | 0.570 |
OJG69319.1 | OJG69318.1 | RV09_GL000718 | RV09_GL000717 | ArpU family phage transcriptional regulator. | Toxin secretion/phage lysis holin. | 0.570 |