Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG65753.1 | OJG66726.1 | RV09_GL001093 | RV09_GL000873 | Hypothetical protein. | Hypothetical protein. | 0.424 |
OJG65753.1 | OJG67067.1 | RV09_GL001093 | RV09_GL002976 | Hypothetical protein. | YhgE/Pip domain-containing protein. | 0.463 |
OJG66725.1 | OJG66726.1 | RV09_GL000872 | RV09_GL000873 | Exodeoxyribonuclease III (xth). | Hypothetical protein. | 0.510 |
OJG66726.1 | OJG65753.1 | RV09_GL000873 | RV09_GL001093 | Hypothetical protein. | Hypothetical protein. | 0.424 |
OJG66726.1 | OJG66725.1 | RV09_GL000873 | RV09_GL000872 | Hypothetical protein. | Exodeoxyribonuclease III (xth). | 0.510 |
OJG66726.1 | OJG67067.1 | RV09_GL000873 | RV09_GL002976 | Hypothetical protein. | YhgE/Pip domain-containing protein. | 0.455 |
OJG66726.1 | OJG67184.1 | RV09_GL000873 | RV09_GL002750 | Hypothetical protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.446 |
OJG66726.1 | OJG68118.1 | RV09_GL000873 | RV09_GL002229 | Hypothetical protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.446 |
OJG66726.1 | OJG68810.1 | RV09_GL000873 | RV09_GL000209 | Hypothetical protein. | Hypothetical protein. | 0.438 |
OJG66726.1 | adk | RV09_GL000873 | RV09_GL001534 | Hypothetical protein. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.438 |
OJG67067.1 | OJG65753.1 | RV09_GL002976 | RV09_GL001093 | YhgE/Pip domain-containing protein. | Hypothetical protein. | 0.463 |
OJG67067.1 | OJG66726.1 | RV09_GL002976 | RV09_GL000873 | YhgE/Pip domain-containing protein. | Hypothetical protein. | 0.455 |
OJG67184.1 | OJG66726.1 | RV09_GL002750 | RV09_GL000873 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.446 |
OJG67184.1 | OJG68118.1 | RV09_GL002750 | RV09_GL002229 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.999 |
OJG67184.1 | OJG68810.1 | RV09_GL002750 | RV09_GL000209 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.540 |
OJG67184.1 | adk | RV09_GL002750 | RV09_GL001534 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.540 |
OJG68118.1 | OJG66726.1 | RV09_GL002229 | RV09_GL000873 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.446 |
OJG68118.1 | OJG67184.1 | RV09_GL002229 | RV09_GL002750 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.999 |
OJG68118.1 | OJG68810.1 | RV09_GL002229 | RV09_GL000209 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.540 |
OJG68118.1 | adk | RV09_GL002229 | RV09_GL001534 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.540 |
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