Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG65356.1 | OJG67210.1 | RV09_GL001212 | RV09_GL002776 | Iron-dependent repressor. | Manganese/iron ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.664 |
OJG65356.1 | OJG67211.1 | RV09_GL001212 | RV09_GL002777 | Iron-dependent repressor. | Manganese transport system membrane protein mntC. | 0.842 |
OJG65356.1 | OJG67212.1 | RV09_GL001212 | RV09_GL002778 | Iron-dependent repressor. | ABC transporter ATP-binding protein. | 0.671 |
OJG65356.1 | OJG67562.1 | RV09_GL001212 | RV09_GL002331 | Iron-dependent repressor. | Zinc ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.719 |
OJG65356.1 | OJG67661.1 | RV09_GL001212 | RV09_GL002430 | Iron-dependent repressor. | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.612 |
OJG65356.1 | OJG67662.1 | RV09_GL001212 | RV09_GL002431 | Iron-dependent repressor. | ABC transporter ATP-binding protein. | 0.671 |
OJG65356.1 | OJG67670.1 | RV09_GL001212 | RV09_GL002439 | Iron-dependent repressor. | ABC transporter permease. | 0.665 |
OJG67210.1 | OJG65356.1 | RV09_GL002776 | RV09_GL001212 | Manganese/iron ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Iron-dependent repressor. | 0.664 |
OJG67210.1 | OJG67211.1 | RV09_GL002776 | RV09_GL002777 | Manganese/iron ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Manganese transport system membrane protein mntC. | 0.999 |
OJG67210.1 | OJG67212.1 | RV09_GL002776 | RV09_GL002778 | Manganese/iron ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | ABC transporter ATP-binding protein. | 0.984 |
OJG67210.1 | OJG67562.1 | RV09_GL002776 | RV09_GL002331 | Manganese/iron ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Zinc ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.758 |
OJG67210.1 | OJG67661.1 | RV09_GL002776 | RV09_GL002430 | Manganese/iron ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.637 |
OJG67210.1 | OJG67662.1 | RV09_GL002776 | RV09_GL002431 | Manganese/iron ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | ABC transporter ATP-binding protein. | 0.878 |
OJG67210.1 | OJG67670.1 | RV09_GL002776 | RV09_GL002439 | Manganese/iron ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | ABC transporter permease. | 0.937 |
OJG67210.1 | OJG68103.1 | RV09_GL002776 | RV09_GL002214 | Manganese/iron ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Hypothetical protein. | 0.622 |
OJG67211.1 | OJG65356.1 | RV09_GL002777 | RV09_GL001212 | Manganese transport system membrane protein mntC. | Iron-dependent repressor. | 0.842 |
OJG67211.1 | OJG67210.1 | RV09_GL002777 | RV09_GL002776 | Manganese transport system membrane protein mntC. | Manganese/iron ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.999 |
OJG67211.1 | OJG67212.1 | RV09_GL002777 | RV09_GL002778 | Manganese transport system membrane protein mntC. | ABC transporter ATP-binding protein. | 0.995 |
OJG67211.1 | OJG67562.1 | RV09_GL002777 | RV09_GL002331 | Manganese transport system membrane protein mntC. | Zinc ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.999 |
OJG67211.1 | OJG67661.1 | RV09_GL002777 | RV09_GL002430 | Manganese transport system membrane protein mntC. | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.944 |
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