Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG67735.1 | OJG67736.1 | RV09_GL002504 | RV09_GL002505 | Hypothetical protein. | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.482 |
OJG67735.1 | OJG67737.1 | RV09_GL002504 | RV09_GL002506 | Hypothetical protein. | Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.482 |
OJG67735.1 | OJG67738.1 | RV09_GL002504 | RV09_GL002507 | Hypothetical protein. | Peptide ABC transporter permease. | 0.482 |
OJG67735.1 | OJG67739.1 | RV09_GL002504 | RV09_GL002508 | Hypothetical protein. | Peptide ABC transporter permease. | 0.425 |
OJG67735.1 | OJG67740.1 | RV09_GL002504 | RV09_GL002509 | Hypothetical protein. | Peptide ABC transporter peptide-binding protein. | 0.402 |
OJG67735.1 | acpP-2 | RV09_GL002504 | RV09_GL002503 | Hypothetical protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.782 |
OJG67735.1 | plsX | RV09_GL002504 | RV09_GL002502 | Hypothetical protein. | Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.480 |
OJG67736.1 | OJG67735.1 | RV09_GL002505 | RV09_GL002504 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. | Hypothetical protein. | 0.482 |
OJG67736.1 | OJG67737.1 | RV09_GL002505 | RV09_GL002506 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. | Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.984 |
OJG67736.1 | OJG67738.1 | RV09_GL002505 | RV09_GL002507 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. | Peptide ABC transporter permease. | 0.995 |
OJG67736.1 | OJG67739.1 | RV09_GL002505 | RV09_GL002508 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. | Peptide ABC transporter permease. | 0.996 |
OJG67736.1 | OJG67740.1 | RV09_GL002505 | RV09_GL002509 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. | Peptide ABC transporter peptide-binding protein. | 0.988 |
OJG67736.1 | acpP-2 | RV09_GL002505 | RV09_GL002503 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.540 |
OJG67737.1 | OJG67735.1 | RV09_GL002506 | RV09_GL002504 | Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | Hypothetical protein. | 0.482 |
OJG67737.1 | OJG67736.1 | RV09_GL002506 | RV09_GL002505 | Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.984 |
OJG67737.1 | OJG67738.1 | RV09_GL002506 | RV09_GL002507 | Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | Peptide ABC transporter permease. | 0.999 |
OJG67737.1 | OJG67739.1 | RV09_GL002506 | RV09_GL002508 | Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | Peptide ABC transporter permease. | 0.999 |
OJG67737.1 | OJG67740.1 | RV09_GL002506 | RV09_GL002509 | Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | Peptide ABC transporter peptide-binding protein. | 0.998 |
OJG67737.1 | acpP-2 | RV09_GL002506 | RV09_GL002503 | Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.817 |
OJG67737.1 | plsX | RV09_GL002506 | RV09_GL002502 | Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.764 |
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