Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG66596.1 | OJG67263.1 | RV09_GL000949 | RV09_GL002829 | Hypothetical protein. | Hypothetical protein. | 0.440 |
OJG66596.1 | OJG67269.1 | RV09_GL000949 | RV09_GL002835 | Hypothetical protein. | Adenine-specific methyltransferase. | 0.723 |
OJG66596.1 | OJG67988.1 | RV09_GL000949 | RV09_GL002099 | Hypothetical protein. | Hypothetical protein. | 0.556 |
OJG66596.1 | OJG68761.1 | RV09_GL000949 | RV09_GL000160 | Hypothetical protein. | Sulfatase. | 0.604 |
OJG66596.1 | OJG68834.1 | RV09_GL000949 | RV09_GL000233 | Hypothetical protein. | TPR domain-containing protein. | 0.700 |
OJG66596.1 | divIB | RV09_GL000949 | RV09_GL001202 | Hypothetical protein. | Hypothetical protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily. | 0.756 |
OJG66596.1 | ezrA | RV09_GL000949 | RV09_GL001757 | Hypothetical protein. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.719 |
OJG67262.1 | OJG67263.1 | RV09_GL002828 | RV09_GL002829 | Competence protein. | Hypothetical protein. | 0.998 |
OJG67262.1 | OJG67264.1 | RV09_GL002828 | RV09_GL002830 | Competence protein. | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | 0.970 |
OJG67262.1 | OJG67269.1 | RV09_GL002828 | RV09_GL002835 | Competence protein. | Adenine-specific methyltransferase. | 0.712 |
OJG67262.1 | ackA | RV09_GL002828 | RV09_GL002836 | Competence protein. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.631 |
OJG67263.1 | OJG66596.1 | RV09_GL002829 | RV09_GL000949 | Hypothetical protein. | Hypothetical protein. | 0.440 |
OJG67263.1 | OJG67262.1 | RV09_GL002829 | RV09_GL002828 | Hypothetical protein. | Competence protein. | 0.998 |
OJG67263.1 | OJG67264.1 | RV09_GL002829 | RV09_GL002830 | Hypothetical protein. | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | 0.990 |
OJG67263.1 | OJG67269.1 | RV09_GL002829 | RV09_GL002835 | Hypothetical protein. | Adenine-specific methyltransferase. | 0.851 |
OJG67263.1 | OJG67988.1 | RV09_GL002829 | RV09_GL002099 | Hypothetical protein. | Hypothetical protein. | 0.485 |
OJG67263.1 | OJG68834.1 | RV09_GL002829 | RV09_GL000233 | Hypothetical protein. | TPR domain-containing protein. | 0.520 |
OJG67263.1 | ackA | RV09_GL002829 | RV09_GL002836 | Hypothetical protein. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.610 |
OJG67263.1 | divIB | RV09_GL002829 | RV09_GL001202 | Hypothetical protein. | Hypothetical protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily. | 0.464 |
OJG67263.1 | ezrA | RV09_GL002829 | RV09_GL001757 | Hypothetical protein. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.606 |
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