Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG52251.1 | OJG52252.1 | RV06_GL001064 | RV06_GL001065 | Hypothetical protein. | UTP-glucose-1-phosphate uridylyltransferase. | 0.798 |
OJG52251.1 | OJG54731.1 | RV06_GL001064 | RV06_GL002690 | Hypothetical protein. | 1-acylglycerol-3-phosphate O-acyltransferase. | 0.501 |
OJG52251.1 | gpsA | RV06_GL001064 | RV06_GL001066 | Hypothetical protein. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.814 |
OJG52251.1 | lgt | RV06_GL001064 | RV06_GL001067 | Hypothetical protein. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.401 |
OJG52252.1 | OJG52251.1 | RV06_GL001065 | RV06_GL001064 | UTP-glucose-1-phosphate uridylyltransferase. | Hypothetical protein. | 0.798 |
OJG52252.1 | gpsA | RV06_GL001065 | RV06_GL001066 | UTP-glucose-1-phosphate uridylyltransferase. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.881 |
OJG52252.1 | lgt | RV06_GL001065 | RV06_GL001067 | UTP-glucose-1-phosphate uridylyltransferase. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.773 |
OJG52624.1 | OJG52625.1 | RV06_GL000932 | RV06_GL000933 | Dihydroxyacetone kinase, L subunit. | Dihydroxyacetone kinase, DhaK subunit. | 0.999 |
OJG52624.1 | OJG53571.1 | RV06_GL000932 | RV06_GL000645 | Dihydroxyacetone kinase, L subunit. | Alpha-glycerophosphate oxidase. | 0.931 |
OJG52624.1 | gpsA | RV06_GL000932 | RV06_GL001066 | Dihydroxyacetone kinase, L subunit. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.922 |
OJG52625.1 | OJG52624.1 | RV06_GL000933 | RV06_GL000932 | Dihydroxyacetone kinase, DhaK subunit. | Dihydroxyacetone kinase, L subunit. | 0.999 |
OJG52625.1 | OJG53571.1 | RV06_GL000933 | RV06_GL000645 | Dihydroxyacetone kinase, DhaK subunit. | Alpha-glycerophosphate oxidase. | 0.934 |
OJG52625.1 | gpsA | RV06_GL000933 | RV06_GL001066 | Dihydroxyacetone kinase, DhaK subunit. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.922 |
OJG53571.1 | OJG52624.1 | RV06_GL000645 | RV06_GL000932 | Alpha-glycerophosphate oxidase. | Dihydroxyacetone kinase, L subunit. | 0.931 |
OJG53571.1 | OJG52625.1 | RV06_GL000645 | RV06_GL000933 | Alpha-glycerophosphate oxidase. | Dihydroxyacetone kinase, DhaK subunit. | 0.934 |
OJG53571.1 | OJG54657.1 | RV06_GL000645 | RV06_GL002616 | Alpha-glycerophosphate oxidase. | YegS//BmrU family lipid kinase. | 0.927 |
OJG53571.1 | OJG54731.1 | RV06_GL000645 | RV06_GL002690 | Alpha-glycerophosphate oxidase. | 1-acylglycerol-3-phosphate O-acyltransferase. | 0.938 |
OJG53571.1 | gpsA | RV06_GL000645 | RV06_GL001066 | Alpha-glycerophosphate oxidase. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.958 |
OJG53571.1 | plsY | RV06_GL000645 | RV06_GL001239 | Alpha-glycerophosphate oxidase. | Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.933 |
OJG54657.1 | OJG53571.1 | RV06_GL002616 | RV06_GL000645 | YegS//BmrU family lipid kinase. | Alpha-glycerophosphate oxidase. | 0.927 |
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