Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG52241.1 | OJG53990.1 | RV06_GL001054 | RV06_GL000383 | Hypothetical protein. | spx/MgsR family transcriptional regulator; Belongs to the ArsC family. | 0.713 |
OJG52241.1 | OJG54109.1 | RV06_GL001054 | RV06_GL003062 | Hypothetical protein. | Hypothetical protein. | 0.667 |
OJG52241.1 | OJG54114.1 | RV06_GL001054 | RV06_GL003067 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0223 family. | 0.413 |
OJG52241.1 | OJG55105.1 | RV06_GL001054 | RV06_GL002142 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0473 family. | 0.464 |
OJG52241.1 | OJG55683.1 | RV06_GL001054 | RV06_GL001265 | Hypothetical protein. | Hypothetical protein. | 0.432 |
OJG52241.1 | spxA | RV06_GL001054 | RV06_GL002698 | Hypothetical protein. | Regulatory protein spx; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily. | 0.747 |
OJG53990.1 | OJG52241.1 | RV06_GL000383 | RV06_GL001054 | spx/MgsR family transcriptional regulator; Belongs to the ArsC family. | Hypothetical protein. | 0.713 |
OJG53990.1 | OJG54109.1 | RV06_GL000383 | RV06_GL003062 | spx/MgsR family transcriptional regulator; Belongs to the ArsC family. | Hypothetical protein. | 0.616 |
OJG53990.1 | OJG55683.1 | RV06_GL000383 | RV06_GL001265 | spx/MgsR family transcriptional regulator; Belongs to the ArsC family. | Hypothetical protein. | 0.455 |
OJG53990.1 | divIB | RV06_GL000383 | RV06_GL001560 | spx/MgsR family transcriptional regulator; Belongs to the ArsC family. | Hypothetical protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily. | 0.495 |
OJG54109.1 | OJG52241.1 | RV06_GL003062 | RV06_GL001054 | Hypothetical protein. | Hypothetical protein. | 0.667 |
OJG54109.1 | OJG53990.1 | RV06_GL003062 | RV06_GL000383 | Hypothetical protein. | spx/MgsR family transcriptional regulator; Belongs to the ArsC family. | 0.616 |
OJG54109.1 | OJG54114.1 | RV06_GL003062 | RV06_GL003067 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0223 family. | 0.553 |
OJG54109.1 | OJG55105.1 | RV06_GL003062 | RV06_GL002142 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0473 family. | 0.740 |
OJG54109.1 | OJG55683.1 | RV06_GL003062 | RV06_GL001265 | Hypothetical protein. | Hypothetical protein. | 0.497 |
OJG54109.1 | divIB | RV06_GL003062 | RV06_GL001560 | Hypothetical protein. | Hypothetical protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily. | 0.741 |
OJG54109.1 | spxA | RV06_GL003062 | RV06_GL002698 | Hypothetical protein. | Regulatory protein spx; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily. | 0.654 |
OJG54114.1 | OJG52241.1 | RV06_GL003067 | RV06_GL001054 | Hypothetical protein; Belongs to the UPF0223 family. | Hypothetical protein. | 0.413 |
OJG54114.1 | OJG54109.1 | RV06_GL003067 | RV06_GL003062 | Hypothetical protein; Belongs to the UPF0223 family. | Hypothetical protein. | 0.553 |
OJG54114.1 | OJG55683.1 | RV06_GL003067 | RV06_GL001265 | Hypothetical protein; Belongs to the UPF0223 family. | Hypothetical protein. | 0.420 |
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