Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG52433.1 | OJG54410.1 | RV06_GL001004 | RV06_GL002753 | Hypothetical protein. | Hypothetical protein. | 0.681 |
OJG52433.1 | OJG55769.1 | RV06_GL001004 | RV06_GL001351 | Hypothetical protein. | CBS domain-containing protein. | 0.627 |
OJG54410.1 | OJG52433.1 | RV06_GL002753 | RV06_GL001004 | Hypothetical protein. | Hypothetical protein. | 0.681 |
OJG54410.1 | OJG55769.1 | RV06_GL002753 | RV06_GL001351 | Hypothetical protein. | CBS domain-containing protein. | 0.633 |
OJG54410.1 | guaA | RV06_GL002753 | RV06_GL000165 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.431 |
OJG54755.1 | OJG55769.1 | RV06_GL002714 | RV06_GL001351 | Hypothetical protein. | CBS domain-containing protein. | 0.696 |
OJG54755.1 | guaA | RV06_GL002714 | RV06_GL000165 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.692 |
OJG54755.1 | guaB | RV06_GL002714 | RV06_GL000688 | Hypothetical protein. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.534 |
OJG54932.1 | OJG55769.1 | RV06_GL002454 | RV06_GL001351 | Glycine betaine/carnitine/choline ABC transporter glycine betaine/carnitine/choline-binding protein. | CBS domain-containing protein. | 0.801 |
OJG54932.1 | guaB | RV06_GL002454 | RV06_GL000688 | Glycine betaine/carnitine/choline ABC transporter glycine betaine/carnitine/choline-binding protein. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.814 |
OJG55767.1 | OJG55769.1 | RV06_GL001349 | RV06_GL001351 | RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | CBS domain-containing protein. | 0.799 |
OJG55767.1 | OJG55770.1 | RV06_GL001349 | RV06_GL001352 | RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Hypothetical protein. | 0.799 |
OJG55767.1 | lspA | RV06_GL001349 | RV06_GL001350 | RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.850 |
OJG55769.1 | OJG52433.1 | RV06_GL001351 | RV06_GL001004 | CBS domain-containing protein. | Hypothetical protein. | 0.627 |
OJG55769.1 | OJG54410.1 | RV06_GL001351 | RV06_GL002753 | CBS domain-containing protein. | Hypothetical protein. | 0.633 |
OJG55769.1 | OJG54755.1 | RV06_GL001351 | RV06_GL002714 | CBS domain-containing protein. | Hypothetical protein. | 0.696 |
OJG55769.1 | OJG54932.1 | RV06_GL001351 | RV06_GL002454 | CBS domain-containing protein. | Glycine betaine/carnitine/choline ABC transporter glycine betaine/carnitine/choline-binding protein. | 0.801 |
OJG55769.1 | OJG55767.1 | RV06_GL001351 | RV06_GL001349 | CBS domain-containing protein. | RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.799 |
OJG55769.1 | OJG55770.1 | RV06_GL001351 | RV06_GL001352 | CBS domain-containing protein. | Hypothetical protein. | 0.892 |
OJG55769.1 | guaA | RV06_GL001351 | RV06_GL000165 | CBS domain-containing protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.833 |
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