STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
impCHypothetical protein; Residues 3 to 463 of 463 are 41.37 pct identical to residues 1 to 464 of 495 from GenPept 118 : gi|2708666|gb|AAB92576.1| (AF037441) putative 54.5 kDa protein [Edwardsiella ictaluri]. (463 aa)    
Predicted Functional Partners:
impB
Hypothetical protein; Residues 1 to 166 of 166 are 99.39 pct identical to residues 1 to 166 of 166 from GenPept 118 : gi|2920642|gb|AAC32477.1| (AF044503) unknown [Escherichia coli].
 
 
 0.998
tssF
Hypothetical protein; No significant matches.
 
  
 0.988
impH
Hypothetical protein; No significant matches.
 
  
 0.983
impJ
Hypothetical protein; Residues 339 to 442 of 443 are 51.92 pct identical to residues 1 to 104 of 105 from GenPept 118 : gi|3341578|emb|CAA13133.1| (AJ231091) z29f [Vibrio cholerae].
 
  
 0.982
impK
Hypothetical protein; No significant matches.
 
  
 0.977
tssE
Hypothetical protein; No significant matches.
 
  
 0.975
tssJ
Hypothetical protein; No significant matches.
 
  
 0.968
imp-2
Hypothetical protein; No significant matches.
 
  
 0.960
tssH
Putative protease; Residues 132 to 884 of 923 are 40.05 pct identical to residues 110 to 838 of 911 from GenPept 118 : gi|530207|gb|AAA66338.1| (L35272) heat shock protein [Glycine max]; Belongs to the ClpA/ClpB family.
 
 
 0.954
hcp
Hypothetical protein; Residues 1 to 148 of 159 are 38.92 pct identical to residues 1 to 144 of 392 from GenPept 118 : gi|606377|gb|AAA58240.1| (U18997) ORF_o392; poor E. coli, good phage statistics [Escherichia coli].
 
 
 0.940
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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