STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z1153Hypothetical protein; No significant matches. (46 aa)    
Predicted Functional Partners:
Z1151
Hypothetical protein; Residues 1 to 42 of 42 are 90.47 pct identical to residues 2 to 43 of 244 from GenPept 118 : gi|398521|gb|AAC44197.1| (U01159) TraT [Escherichia coli].
      
 0.681
Z1155
Hypothetical protein; No significant matches.
      
 0.681
Z1156
Hypothetical protein; No significant matches.
      
 0.681
Z2096
Unknown protein encoded within prophage CP-933O; Residues 4 to 61 of 160 are 79.31 pct identical to residues 111 to 168 of 203 from GenPept 118 : gi|1787624|gb|AAC74443.1| (AE000233) orf, hypothetical protein [Escherichia coli].
      
 0.681
Z2121
Unknown protein encoded within prophage CP-933O; No significant matches.
      
 0.681
Z4331
Hypothetical protein; No significant matches.
      
 0.681
Z2098
Unknown protein encoded within prophage CP-933O; Residues 109 to 185 of 185 are 67.94 pct identical to residues 129 to 206 of 207 from GenPept 118 : gi|4585382|gb|AAD25410.1|AF125520_5 (AF125520) hypothetical protein [Bacteriophage 933W].
      
 0.643
Z2099
Unknown protein encoded within prophage CP-933O; Residues 1 to 114 of 114 are 99.12 pct identical to residues 1 to 114 of 114 from GenPept 118 : gi|4585451|gb|AAD25479.1|AF125520_74 (AF125520) hypothetical protein [Bacteriophage 933W].
      
 0.643
Z6065
Unknown protein encoded by cryptic prophage CP-933P; Residues 21 to 214 of 214 are 28.82 pct identical to residues 1 to 206 of 207 from Genpept121: gb|AAD25410.1|AF125520_5 (AF125520) hypothetical protein [Bacteriophage 933W].
      
 0.577
Z2041
Unknown protein encoded by prophage CP-933O; No significant matches.
      
 0.463
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.