STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ag43Putative adhesin; Residues 47 to 1005 of 1005 are 68.44 pct identical to residues 43 to 1091 of 1091 from GenPept 118 : gi|1736670|dbj|BAA15825.1| (D90838) Adhesin AIDA-I precursor. [Escherichia coli]. (1005 aa)    
Predicted Functional Partners:
yfjP
Putative histone; Residues 108 to 290 of 290 are 95.08 pct identical to residues 54 to 236 of 236 from GenPept 118 : gi|1788308|gb|AAC75060.1| (AE000291) putative histone [Escherichia coli].
 
   
 0.913
Z1650
Unknown; Residues 108 to 290 of 290 are 95.08 pct identical to residues 54 to 236 of 236 from GenPept 118 : gi|1788308|gb|AAC75060.1| (AE000291) putative histone [Escherichia coli].
  
   
 0.851
Z1651
Putative adhesin; Residues 47 to 990 of 992 are 67.88 pct identical to residues 43 to 1076 of 1091 from GenPept 118 : gi|1736670|dbj|BAA15825.1| (D90838) Adhesin AIDA-I precursor. [Escherichia coli].
  
 
 
0.801
recT
Recombinase, DNA renaturation protein encoded by prophage CP-933R; Residues 1 to 269 of 269 are 98.51 pct identical to residues 1 to 269 of 269 from Escherichia coli K-12 Strain MG1655: B1349.
  
   
 0.769
yddB
Orf, hypothetical protein; Residues 1 to 790 of 790 are 98.86 pct identical to residues 1 to 790 of 790 from Escherichia coli K-12 Strain MG1655: B1495.
  
 
   0.767
recE
Putative exodeoxyribonuclease VIII of prophage CP-933R; Residues 1 to 866 of 866 are 99.19 pct identical to residues 1 to 866 of 866 from Escherichia coli K-12 Strain MG1655: B1350.
  
  
 0.763
Z5932
Putative invasin; Residues 21 to 1512 of 1700 are 48.74 pct identical to residues 76 to 1579 of 2349 from GenPept 118 : gi|1736642|dbj|BAA15799.1| (D90836) Invasin. [Escherichia coli].
  
     0.716
Z1866
Putative integrase of prophage CP-933X; Residues 1 to 380 of 380 are 98.42 pct identical to residues 1 to 380 of 380 from GenPept 118 : gi|215450|gb|AAA32336.1| (M61865) integrase [Bacteriophage 21]; Belongs to the 'phage' integrase family.
  
     0.706
ydeS
Putative fimbrial-like protein; Residues 1 to 176 of 176 are 99.43 pct identical to residues 1 to 176 of 176 from Escherichia coli K-12 Strain MG1655: B1504.
  
     0.693
Z3135
Putative invasin; Residues 794 to 2660 of 2660 are 71.80 pct identical to residues 504 to 2383 of 2383 from Escherichia coli K-12 Strain MG1655: B1978; Belongs to the intimin/invasin family.
  
     0.688
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.