STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z1220Putative structural protein; Residues 1 to 118 of 124 are 90.67 pct identical to residues 1 to 118 of 122 from GenPept 118 : gi|1788314|gb|AAC75065.1| (AE000292) putative structural protein [Escherichia coli]. (124 aa)    
Predicted Functional Partners:
Z1218
Orf, hypothetical protein; Residues 1 to 73 of 73 are 97.26 pct identical to residues 1 to 73 of 73 from GenPept 118 : gi|1788313|gb|AAC75064.1| (AE000292) orf, hypothetical protein [Escherichia coli].
  
    0.628
Z1219
Hypothetical protein; No significant matches.
       0.615
radC-2
Putative DNA repair protein, RADC family; Residues 11 to 158 of 158 are 98.64 pct identical to residues 1 to 148 of 148 from GenPept 118 : gi|1788312|gb|AAC75063.1| (AE000292) putative DNA repair protein, RADC family [Escherichia coli]; Belongs to the UPF0758 family.
  
  
 0.511
Z1216
Unknown; Residues 18 to 161 of 161 are 71.03 pct identical to residues 10 to 152 of 152 from GenPept 118 : gi|1786442|gb|AAC73351.1| (AE000133) orf, hypothetical protein [Escherichia coli].
  
  
 0.491
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.