STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z1871Unknown protein encoded by prophage CP-933X; Residues 1 to 508 of 508 are 99.40 pct identical to residues 1 to 508 of 508 from GenPept 118 : gi|1786756|gb|AAC73645.1| (AE000160) orf, hypothetical protein [Escherichia coli]. (508 aa)    
Predicted Functional Partners:
Z3135
Putative invasin; Residues 794 to 2660 of 2660 are 71.80 pct identical to residues 504 to 2383 of 2383 from Escherichia coli K-12 Strain MG1655: B1978; Belongs to the intimin/invasin family.
  
     0.760
yibA
Orf, hypothetical protein; Residues 1 to 280 of 280 are 100.00 pct identical to residues 1 to 280 of 280 from Escherichia coli K-12 Strain MG1655: B3594.
  
   
 0.745
ygeH
Putative invasion protein; Residues 1 to 458 of 458 are 96.72 pct identical to residues 1 to 458 of 458 from Escherichia coli K-12 Strain MG1655: B2852.
  
     0.733
yhdJ
Putative methyltransferase; Residues 1 to 296 of 296 are 98.98 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 Strain MG1655: B3262; Belongs to the N(4)/N(6)-methyltransferase family.
  
  
 0.733
Z2060
Putative DNA adenine methyltransferase encoded by prophage CP-933O; Residues 41 to 352 of 352 are 85.89 pct identical to residues 1 to 312 of 312 from GenPept 118 : gi|8346570|emb|CAB93763.1| (AJ249351) hypothetical protein [Bacteriophage P27]; Belongs to the N(4)/N(6)-methyltransferase family.
  
  
 0.731
htrL
Involved in lipopolysaccharide biosynthesis; Residues 1 to 290 of 290 are 99.65 pct identical to residues 1 to 290 of 290 from Escherichia coli K-12 Strain MG1655: B3618.
  
     0.728
ybhM
Orf, hypothetical protein; Residues 1 to 237 of 237 are 96.20 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 Strain MG1655: B0787.
  
     0.724
Z1853
Unknown protein encoded by prophage CP-933C; Residues 6 to 117 of 118 are 64.28 pct identical to residues 8 to 119 of 122 from GenPept 118 : gi|6739657|gb|AAF27358.1|AF198256_12 (AF198256) unknown [Haemophilus influenzae].
     
 0.724
ybeS
Putative enzyme of polynucleotide modification; Residues 1 to 475 of 475 are 97.05 pct identical to residues 1 to 475 of 475 from Escherichia coli K-12 Strain MG1655: B0646.
  
    0.723
recE
Putative exodeoxyribonuclease VIII of prophage CP-933R; Residues 1 to 866 of 866 are 99.19 pct identical to residues 1 to 866 of 866 from Escherichia coli K-12 Strain MG1655: B1350.
  
     0.716
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.