STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z2969Unknown protein encoded by prophage CP-933T; Residues 6 to 107 of 134 are 32.40 pct identical to residues 8 to 115 of 123 from GenPept 118 : gi|7226247|gb|AAF41408.1| (AE002452) transcriptional regulator [Neisseria meningitidis MC58]. (134 aa)    
Predicted Functional Partners:
intT
Integrase for prophage CP-933T; Residues 1 to 331 of 333 are 57.86 pct identical to residues 1 to 334 of 337 from GenPept 118 : gi|1679807|emb|CAA96221.1| (Z71579) integrase [Bacteriophage S2].
     
 0.899
Z2973
Unknown protein encoded by prophage CP-933T; No significant matches.
     
 0.814
coxT
Putative regulator for prophage CP-933T; Residues 4 to 59 of 67 are 46.42 pct identical to residues 2 to 57 of 70 from GenPept 118 : gi|4530499|gb|AAD22064.1| (AF125163) Cox [Bacteriophage K139].
     
 0.812
Z2968
Unknown protein encoded by prophage CP-933T; No significant matches.
       0.741
Z5212
Hypothetical protein; No significant matches.
      
 0.721
Z5213
Hypothetical protein; No significant matches.
      
 0.721
ygeK
Putative 2-component transcriptional regulator; Residues 1 to 148 of 148 are 100.00 pct identical to residues 1 to 148 of 148 from Escherichia coli K-12 Strain MG1655: B2855.
    
 
 0.715
Z0326
Unknown protein encoded in prophage CP-933I; No significant matches.
      
 0.703
Z2967
Unknown protein encoded by prophage CP-933T; No significant matches.
       0.655
qseA
Quorum sensing Escherichia coli regulator A; Activates transcription of the aaeXAB operon.
  
  
 0.477
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.