Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
yedD | yedE | Z3018 | Z3019 | Orf, hypothetical protein; Residues 1 to 137 of 137 are 99.27 pct identical to residues 1 to 137 of 137 from Escherichia coli K-12 Strain MG1655: B1928. | Putative transport system permease protein; Residues 1 to 401 of 401 are 99.75 pct identical to residues 1 to 401 of 401 from Escherichia coli K-12 Strain MG1655: B1929. | 0.503 |
yedD | yedF | Z3018 | Z3020 | Orf, hypothetical protein; Residues 1 to 137 of 137 are 99.27 pct identical to residues 1 to 137 of 137 from Escherichia coli K-12 Strain MG1655: B1928. | Orf, hypothetical protein; Residues 1 to 77 of 77 are 100.00 pct identical to residues 1 to 77 of 77 from Escherichia coli K-12 Strain MG1655: B1930; Belongs to the sulfur carrier protein TusA family. | 0.503 |
yedE | yedD | Z3019 | Z3018 | Putative transport system permease protein; Residues 1 to 401 of 401 are 99.75 pct identical to residues 1 to 401 of 401 from Escherichia coli K-12 Strain MG1655: B1929. | Orf, hypothetical protein; Residues 1 to 137 of 137 are 99.27 pct identical to residues 1 to 137 of 137 from Escherichia coli K-12 Strain MG1655: B1928. | 0.503 |
yedE | yedF | Z3019 | Z3020 | Putative transport system permease protein; Residues 1 to 401 of 401 are 99.75 pct identical to residues 1 to 401 of 401 from Escherichia coli K-12 Strain MG1655: B1929. | Orf, hypothetical protein; Residues 1 to 77 of 77 are 100.00 pct identical to residues 1 to 77 of 77 from Escherichia coli K-12 Strain MG1655: B1930; Belongs to the sulfur carrier protein TusA family. | 0.998 |
yedF | yedD | Z3020 | Z3018 | Orf, hypothetical protein; Residues 1 to 77 of 77 are 100.00 pct identical to residues 1 to 77 of 77 from Escherichia coli K-12 Strain MG1655: B1930; Belongs to the sulfur carrier protein TusA family. | Orf, hypothetical protein; Residues 1 to 137 of 137 are 99.27 pct identical to residues 1 to 137 of 137 from Escherichia coli K-12 Strain MG1655: B1928. | 0.503 |
yedF | yedE | Z3020 | Z3019 | Orf, hypothetical protein; Residues 1 to 77 of 77 are 100.00 pct identical to residues 1 to 77 of 77 from Escherichia coli K-12 Strain MG1655: B1930; Belongs to the sulfur carrier protein TusA family. | Putative transport system permease protein; Residues 1 to 401 of 401 are 99.75 pct identical to residues 1 to 401 of 401 from Escherichia coli K-12 Strain MG1655: B1929. | 0.998 |