STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfcQPutative minor fimbrial subunit; Residues 19 to 156 of 156 are 53.19 pct identical to residues 22 to 162 of 162 from Escherichia coli K-12 Strain MG1655: B2334. (156 aa)    
Predicted Functional Partners:
yfcO
Orf; Residues 32 to 280 of 280 are 43.92 pct identical to residues 26 to 278 of 278 from Escherichia coli K-12 Strain MG1655: B2332.
  
  
 0.954
yfcP
Putative minor fimbrial subunit; Residues 1 to 172 of 173 are 56.89 pct identical to residues 5 to 178 of 179 from Escherichia coli K-12 Strain MG1655: B2333.
  
  
 0.950
yfcS
Putative fimbrial chaperone; Residues 1 to 250 of 252 are 85.60 pct identical to residues 1 to 250 of 250 from Escherichia coli K-12 Strain MG1655: B2336.
  
   0.821
yfcR
Putative minor fimbrial subunit; Residues 32 to 197 of 197 are 47.59 pct identical to residues 6 to 170 of 170 from Escherichia coli K-12 Strain MG1655: B2335.
     
0.785
yfcU
Putative fimbrial usher; Residues 1 to 577 of 879 are 90.48 pct identical to residues 1 to 578 of 578 from Escherichia coli K-12 Strain MG1655: B2338.
  
   0.746
yadN
Putative fimbrial protein; Residues 7 to 201 of 201 are 39.50 pct identical to residues 8 to 194 of 194 from Escherichia coli K-12 Strain MG1655: B0141.
      
 0.555
yfcV
Putative major fimbrial subunit; Residues 1 to 187 of 187 are 88.77 pct identical to residues 1 to 187 of 187 from Escherichia coli K-12 Strain MG1655: B2339.
  
  
 0.540
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
Server load: low (14%) [HD]