STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlpALipoprotein-28; Residues 1 to 272 of 272 are 97.42 pct identical to residues 1 to 272 of 272 from Escherichia coli K-12 Strain MG1655: B3661. (272 aa)    
Predicted Functional Partners:
yaeE
Putative transport system permease protein; Part of the binding-protein-dependent transport system for D- methionine and the toxic methionine analog alpha-methyl-methionine. Probably responsible for the translocation of the substrate across the membrane (By similarity).
 0.996
abc
ATP-binding component of a transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.993
yaeC
Putative lipoprotein; This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system.
  
  
 
0.902
yicL
Putative permease transporter; Residues 1 to 307 of 307 are 98.37 pct identical to residues 1 to 307 of 307 from Escherichia coli K-12 Strain MG1655: B3660.
      
 0.700
yicJ
Putative permease; Residues 1 to 479 of 479 are 99.58 pct identical to residues 1 to 479 of 479 from Escherichia coli K-12 Strain MG1655: B3657.
      
 0.692
yicI
Orf, hypothetical protein; Residues 1 to 772 of 772 are 98.05 pct identical to residues 1 to 772 of 772 from Escherichia coli K-12 Strain MG1655: B3656; Belongs to the glycosyl hydrolase 31 family.
      
 0.617
cysC
Adenosine 5'-phosphosulfate kinase; Catalyzes the synthesis of activated sulfate.
   
    0.541
cysD
ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2; Residues 1 to 302 of 302 are 99.66 pct identical to residues 1 to 302 of 302 from Escherichia coli K-12 Strain MG1655: B2752.
   
  
 0.528
yicS
Hypothetical protein; No significant matches.
       0.522
cysN
ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1, probably a GTPase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
    0.518
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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