STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z5690Putative permease of ribose ABC transport system; Residues 2 to 318 of 324 are 43.78 pct identical to residues 3 to 321 of 322 from GenPept 118 : gi|2636120|emb|CAB15612.1| (Z99122) ribose ABC transporter (permease) [Bacillus subtilis]; Belongs to the binding-protein-dependent transport system permease family. (324 aa)    
Predicted Functional Partners:
rbsA2
Putative ATP-binding protein of ribose ABC transport system; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.990
Z5689
Putative periplasmic ribose-binding protein of ABC transport system; Residues 6 to 309 of 313 are 35.04 pct identical to residues 348 to 651 of 651 from GenPept 118 : gi|6714794|emb|CAB66286.1| (AL136519) bifunctional carbohydrate binding and transport protein. [Streptomyces coelicolor A3(2)].
  
 0.987
rbsA
ATP-binding component of D-ribose high-affinity transport system; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.959
rbsB
D-ribose periplasmic binding protein; Residues 1 to 296 of 296 are 99.66 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 Strain MG1655: B3751.
  
 0.958
rbsC
D-ribose high-affinity transport system; Part of the ABC transporter complex RbsABC involved in ribose import. Probably responsible for the translocation of the substrate across the membrane.
  
 
 
0.911
xylG
Putative ATP-binding protein of xylose transport system; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
   
 0.798
araG
ATP-binding component of high-affinity L-arabinose transport system; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
   
 0.792
mglA
ATP-binding component of methyl-galactoside transport and galactose taxis; Part of the ABC transporter complex MglABC involved in galactose/methyl galactoside import. Responsible for energy coupling to the transport system.
   
 0.786
yphE
Putative ATP-binding component of a transport system; Residues 1 to 503 of 503 are 99.00 pct identical to residues 1 to 503 of 503 from Escherichia coli K-12 Strain MG1655: B2547.
   
 0.784
Z0417
Putative ATP-binding component of transport system, probably ribose specific; Residues 13 to 392 of 392 are 36.64 pct identical to residues 114 to 491 of 493 from GenPept 118 : gi|2636119|emb|CAB15611.1| (Z99122) ribose ABC transporter (ATP-binding protein) [Bacillus subtilis].
   
 0.776
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.