node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
acrR | rob | Z0579 | Z5999 | acrAB operon repressor; Residues 1 to 215 of 215 are 99.53 pct identical to residues 1 to 215 of 215 from Escherichia coli K-12 Strain MG1655: B0464. | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | 0.566 |
rhaR | rhaS | Z5450 | Z5449 | Positive regulator for rhaRS operon; Activates expression of the rhaSR operon in response to L- rhamnose. | Positive regulator for rhaBAD operon; Activates expression of the rhaBAD and rhaT operons. | 0.853 |
rhaR | rob | Z5450 | Z5999 | Positive regulator for rhaRS operon; Activates expression of the rhaSR operon in response to L- rhamnose. | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | 0.716 |
rhaR | rpoD | Z5450 | Z4420 | Positive regulator for rhaRS operon; Activates expression of the rhaSR operon in response to L- rhamnose. | RNA polymerase, sigma(70) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.794 |
rhaR | ydiP | Z5450 | Z2724 | Positive regulator for rhaRS operon; Activates expression of the rhaSR operon in response to L- rhamnose. | Putative ARAC-type regulatory protein; Residues 1 to 303 of 303 are 99.33 pct identical to residues 1 to 303 of 303 from Escherichia coli K-12 Strain MG1655: B1696. | 0.796 |
rhaS | rhaR | Z5449 | Z5450 | Positive regulator for rhaBAD operon; Activates expression of the rhaBAD and rhaT operons. | Positive regulator for rhaRS operon; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.853 |
rhaS | rob | Z5449 | Z5999 | Positive regulator for rhaBAD operon; Activates expression of the rhaBAD and rhaT operons. | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | 0.601 |
rhaS | rpoD | Z5449 | Z4420 | Positive regulator for rhaBAD operon; Activates expression of the rhaBAD and rhaT operons. | RNA polymerase, sigma(70) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.519 |
rhaS | ydiP | Z5449 | Z2724 | Positive regulator for rhaBAD operon; Activates expression of the rhaBAD and rhaT operons. | Putative ARAC-type regulatory protein; Residues 1 to 303 of 303 are 99.33 pct identical to residues 1 to 303 of 303 from Escherichia coli K-12 Strain MG1655: B1696. | 0.453 |
rob | acrR | Z5999 | Z0579 | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | acrAB operon repressor; Residues 1 to 215 of 215 are 99.53 pct identical to residues 1 to 215 of 215 from Escherichia coli K-12 Strain MG1655: B0464. | 0.566 |
rob | rhaR | Z5999 | Z5450 | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | Positive regulator for rhaRS operon; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.716 |
rob | rhaS | Z5999 | Z5449 | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | Positive regulator for rhaBAD operon; Activates expression of the rhaBAD and rhaT operons. | 0.601 |
rob | rpoA | Z5999 | Z4665 | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.629 |
rob | rpoB | Z5999 | Z5560 | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.699 |
rob | rpoC | Z5999 | Z5561 | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | RNA polymerase, beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.647 |
rob | rpoD | Z5999 | Z4420 | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | RNA polymerase, sigma(70) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.558 |
rob | rpoS | Z5999 | Z4049 | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | RNA polymerase, sigma S (sigma38) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. | 0.558 |
rob | rpoZ | Z5999 | Z5075 | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits (By similarity). | 0.647 |
rob | ydiP | Z5999 | Z2724 | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | Putative ARAC-type regulatory protein; Residues 1 to 303 of 303 are 99.33 pct identical to residues 1 to 303 of 303 from Escherichia coli K-12 Strain MG1655: B1696. | 0.651 |
rpoA | rob | Z4665 | Z5999 | RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Right origin-binding protein; Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication (By similarity). | 0.629 |