STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chuTPutative periplasmic binding protein; Residues 1 to 304 of 304 are 97.36 pct identical to residues 1 to 304 of 304 from GenPept 118 : gi|2967538|gb|AAC27815.1| (U64516) unknown [Shigella dysenteriae]. (304 aa)    
Predicted Functional Partners:
chuU
Putative permease of iron compound ABC transport system; Residues 13 to 330 of 330 are 99.37 pct identical to residues 1 to 318 of 318 from GenPept 118 : gi|2967535|gb|AAC27812.1| (U64516) unknown [Shigella dysenteriae]; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.989
chuS
Putative heme/hemoglobin transport protein; Residues 1 to 342 of 342 are 98.53 pct identical to residues 1 to 342 of 342 from GenPept 118 : gi|2967533|gb|AAC27810.1| (U64516) unknown [Shigella dysenteriae].
 
  
 0.988
hmuV
Putative ATP-binding protein of ABC transport system; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.981
fecD
Putative iron compound ABC transporter, permease protein; Residues 2 to 324 of 326 are 40.00 pct identical to residues 8 to 334 of 337 from GenPept 118 : gi|1574312|gb|AAC23119.1| (U32825) iron chelatin ABC transporter, permease protein, putative [Haemophilus influenzae Rd]; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.922
fitD
Putative iron compound permease protein of ABC transporter family; Residues 24 to 342 of 349 are 33.84 pct identical to residues 7 to 332 of 336 from GenPept 118 : gi|2635844|emb|CAB15336.1| (Z99121) ferrichrome ABC transporter (permease) [Bacillus subtilis]; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.918
fitC
Putative iron compound permease protein of ABC transporter family; Residues 13 to 327 of 327 are 43.67 pct identical to residues 30 to 343 of 343 from GenPept 118 : gi|1651662|dbj|BAA16590.1| (D90899) iron(III) dicitrate transport system permease protein FecC [Synechocystis sp.]; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.915
fepD
Ferric enterobactin (enterochelin) transport; Residues 1 to 334 of 334 are 99.70 pct identical to residues 1 to 334 of 334 from Escherichia coli K-12 Strain MG1655: B0590; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.909
chuA
Outer membrane heme/hemoglobin receptor; Residues 1 to 660 of 660 are 100.00 pct identical to residues 1 to 660 of 660 from GenPept 118 : gi|1763009|gb|AAC44857.1| (U67920) ChuA [Escherichia coli].
 
  
 0.878
fhuB
Hydroxamate-dependent iron uptake, cytoplasmic membrane component; Residues 1 to 660 of 660 are 99.39 pct identical to residues 1 to 660 of 660 from Escherichia coli K-12 Strain MG1655: B0153; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.862
chuX
Orf; Residues 1 to 164 of 164 are 98.17 pct identical to residues 1 to 164 of 164 from GenPept 118 : gi|2967537|gb|AAC27814.1| (U64516) unknown [Shigella dysenteriae].
 
  
 0.841
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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