Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN95623.1 | SFN95652.1 | SAMN05216515_10369 | SAMN05216515_10370 | Amidohydrolase. | Protein of unknown function. | 0.780 |
SFN95623.1 | SFN95679.1 | SAMN05216515_10369 | SAMN05216515_10371 | Amidohydrolase. | Hypothetical protein. | 0.640 |
SFN95623.1 | SFN95708.1 | SAMN05216515_10369 | SAMN05216515_10372 | Amidohydrolase. | Lysophospholipase L1. | 0.481 |
SFN95623.1 | SFN95739.1 | SAMN05216515_10369 | SAMN05216515_10373 | Amidohydrolase. | Alanine or glycine:cation symporter, AGCS family. | 0.464 |
SFN95623.1 | glyA | SAMN05216515_10369 | SAMN05216515_10368 | Amidohydrolase. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.445 |
SFN95652.1 | SFN95623.1 | SAMN05216515_10370 | SAMN05216515_10369 | Protein of unknown function. | Amidohydrolase. | 0.780 |
SFN95652.1 | SFN95679.1 | SAMN05216515_10370 | SAMN05216515_10371 | Protein of unknown function. | Hypothetical protein. | 0.933 |
SFN95652.1 | SFN95708.1 | SAMN05216515_10370 | SAMN05216515_10372 | Protein of unknown function. | Lysophospholipase L1. | 0.481 |
SFN95652.1 | SFN95739.1 | SAMN05216515_10370 | SAMN05216515_10373 | Protein of unknown function. | Alanine or glycine:cation symporter, AGCS family. | 0.464 |
SFN95652.1 | SFO07558.1 | SAMN05216515_10370 | SAMN05216515_10673 | Protein of unknown function. | Aminobenzoyl-glutamate utilization protein B. | 0.515 |
SFN95652.1 | glyA | SAMN05216515_10370 | SAMN05216515_10368 | Protein of unknown function. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.444 |
SFN95679.1 | SFN95623.1 | SAMN05216515_10371 | SAMN05216515_10369 | Hypothetical protein. | Amidohydrolase. | 0.640 |
SFN95679.1 | SFN95652.1 | SAMN05216515_10371 | SAMN05216515_10370 | Hypothetical protein. | Protein of unknown function. | 0.933 |
SFN95679.1 | SFN95708.1 | SAMN05216515_10371 | SAMN05216515_10372 | Hypothetical protein. | Lysophospholipase L1. | 0.584 |
SFN95679.1 | SFN95739.1 | SAMN05216515_10371 | SAMN05216515_10373 | Hypothetical protein. | Alanine or glycine:cation symporter, AGCS family. | 0.561 |
SFN95679.1 | SFO07558.1 | SAMN05216515_10371 | SAMN05216515_10673 | Hypothetical protein. | Aminobenzoyl-glutamate utilization protein B. | 0.445 |
SFN95679.1 | glyA | SAMN05216515_10371 | SAMN05216515_10368 | Hypothetical protein. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.427 |
SFN95708.1 | SFN95623.1 | SAMN05216515_10372 | SAMN05216515_10369 | Lysophospholipase L1. | Amidohydrolase. | 0.481 |
SFN95708.1 | SFN95652.1 | SAMN05216515_10372 | SAMN05216515_10370 | Lysophospholipase L1. | Protein of unknown function. | 0.481 |
SFN95708.1 | SFN95679.1 | SAMN05216515_10372 | SAMN05216515_10371 | Lysophospholipase L1. | Hypothetical protein. | 0.584 |
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