STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO24591.1Putative TM nitroreductase. (269 aa)    
Predicted Functional Partners:
SFO24630.1
NADPH:quinone reductase.
 
     0.825
SFO26505.1
Uroporphyrinogen III methyltransferase / synthase.
  
 
 0.822
SFO24609.1
Rrf2 family protein.
       0.773
SFO24572.1
Predicted DNA-binding protein, MmcQ/YjbR family.
       0.649
SFO01664.1
Rhodanese-related sulfurtransferase.
    
 0.553
SFO32456.1
Rhodanese-like domain-containing protein; Belongs to the sulfur carrier protein TusA family.
    
 0.553
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.551
SFO24535.1
Hypothetical protein.
  
 
  0.538
SFO24555.1
Hypothetical protein.
  
 
  0.538
SFO24651.1
Hypothetical protein.
       0.538
Your Current Organism:
Eubacterium pyruvativorans
NCBI taxonomy Id: 155865
Other names: ATCC BAA-574, E. pyruvativorans, Eubacterium pyruvativorans Wallace et al. 2003, Eubacterium pyruvivorans, Eubacterium pyruvovorans, NCIMB 13911, strain I-6, strain i6
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.