STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO36182.1Cysteine desulfurase family protein. (381 aa)    
Predicted Functional Partners:
SFO36130.1
Phosphoadenosine phosphosulfate reductase.
  
  0.946
SFO36150.1
Protein of unknown function.
 
     0.939
SFO36166.1
Hypothetical protein.
 
     0.939
SFO36203.1
Superfamily II DNA or RNA helicase.
 
     0.883
SFN90843.1
Nitrogen fixation protein NifU.
  
 0.839
SFO13898.1
NifU homolog involved in Fe-S cluster formation.
  
 0.792
SFO36243.1
DNA sulfur modification protein DndD.
 
    0.788
SFO36110.1
DNA (cytosine-5)-methyltransferase 1.
       0.632
SFO09263.1
Cysteine desulfurase family protein.
  
  
 
0.589
SFO09160.1
Selenophosphate synthase.
  
 0.538
Your Current Organism:
Eubacterium pyruvativorans
NCBI taxonomy Id: 155865
Other names: ATCC BAA-574, E. pyruvativorans, Eubacterium pyruvativorans Wallace et al. 2003, Eubacterium pyruvivorans, Eubacterium pyruvovorans, NCIMB 13911, strain I-6, strain i6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.