STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH83133.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (416 aa)    
Predicted Functional Partners:
AOH83132.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.875
AOH83134.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
AOH86385.1
Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.690
AOH83135.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0311 family.
 
    0.641
AOH83136.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
AOH83131.1
Levansucrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 68 family.
       0.554
AOH86811.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.549
AOH86964.1
NmrA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
AOH83112.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.514
AOH85298.1
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.481
Your Current Organism:
Sphingomonas panacis
NCBI taxonomy Id: 1560345
Other names: JCM 30806, KCTC 42347, S. panacis, Sphingomonas panacis Singh et al. 2017, Sphingomonas sp. DCY99, strain DCY99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.