Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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NPD11_100coA_E_activ: putative CoA-substrate-specific enzyme activase domain protein; [I] COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain). (1434 aa)    
Predicted Functional Partners:
NPD11_578
coA_E_activ: putative CoA-substrate-specific enzyme activase domain protein; [I] COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain).
 
 
0.811
NPD11_99
Tetratricopeptide repeat family protein; [R] COG0457 FOG: TPR repeat.
       0.639
NPD11_960
Conserved hypothetical protein; [S] COG4905 Predicted membrane protein.
 
    0.632
NPD11_579
2-hydroxyglutaryl-CoA dehydratase, D-component family protein; [E] COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB.
  
 
 0.601
NPD11_704
Conserved hypothetical protein; [S] COG4905 Predicted membrane protein.
 
    0.593
NPD11_703
Conserved hypothetical protein; [S] COG4905 Predicted membrane protein.
 
    0.591
AQM59577.1
Conserved hypothetical protein; [S] COG4905 Predicted membrane protein.
 
    0.533
valS
valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.520
AQM59241.1
Putative dihydrodipicolinate synthase/N-acetylneuraminate lyase.
 
     0.473
nrdD
nrdD: anaerobic ribonucleoside-triphosphate reductase; [F] COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase.
 
    0.464
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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