STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM58720.1Acyltransferase family protein; [G] COG3594 Fucose 4-O-acetylase and related acetyltransferases. (325 aa)    
Predicted Functional Partners:
AQM61095.1
Acyltransferase family protein; [G] COG3594 Fucose 4-O-acetylase and related acetyltransferases.
  
     0.567
AQM60010.1
HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein; [R] COG0546 Predicted phosphatases.
       0.530
AQM61384.1
NMT1-like family protein; [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
       0.487
NPD11_998
Flavin reductase like domain protein; [R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
       0.479
NPD11_999
arsC family protein; [P] COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
       0.479
NPD11_548
Iron Transport-associated domain protein.
  
     0.427
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; [C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
       0.408
NPD11_956
Hypothetical protein.
  
     0.400
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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