Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQM61384.1NMT1-like family protein; [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (343 aa)    
Predicted Functional Partners:
AQM59637.1
Binding--dependent transport system inner membrane component family protein; [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.971
AQM61207.1
ABC transporter family protein; [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
 0.969
NPD11_915
Binding--dependent transport system inner membrane component family protein; [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.777
NPD11_916
ABC transporter family protein; [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
 0.709
NPD11_951
Binding--dependent transport system inner membrane component family protein; [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
 
 0.670
NPD11_950
ABC transporter family protein; [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
 
 0.659
gpr
GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.624
yqfC
spore_yqfC: sporulation protein YqfC.
  
     0.593
spoIIIAG
spore_III_AG: stage III sporulation protein AG.
  
     0.550
yyaC
spore_YyaC: putative sporulation protein YyaC.
  
     0.538
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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