STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59318.1tspO/MBR family protein; [T] COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog). (166 aa)    
Predicted Functional Partners:
AQM60003.1
[T] COG0642 Signal transduction histidine kinase.
     
 0.663
AQM60591.1
DNA topoisomerase family protein; [L] COG0550 Topoisomerase IA.
  
  
 0.643
AQM59022.1
[T] COG0642 Signal transduction histidine kinase.
       0.591
AQM60987.1
PGAP1-like family protein; [I] COG2267 Lysophospholipase.
       0.492
AQM59621.1
Low molecular weight phosphotyrosine phosphatase family protein; [T] COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
    0.477
ptsG
PTS system glucose-specific EIICBA component; [G] COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
       0.407
NPD11_29
Amidinotransferase family protein; [E] COG1834 N-Dimethylarginine dimethylaminohydrolase.
   
    0.402
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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