STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
larCAsparagine synthase family protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family. (665 aa)    
Predicted Functional Partners:
AQM59059.1
[R] COG1691 NCAIR mutase (PurE)-related proteins.
 
  
 0.981
AQM60295.1
Hypothetical protein.
 
  
 0.905
AQM59037.1
[P] COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
    0.577
AQM59050.1
Cobalt uptake substrate-specific transmembrane region family protein; [P] COG0310 ABC-type Co2+ transport system, permease component.
 
    0.486
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
       0.426
cinA
pncC_: amidohydrolase, PncC family domain protein; [R] COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
       0.426
AQM60761.1
[C] COG2025 Electron transfer flavoprotein, alpha subunit.
  
    0.417
AQM59460.1
FAD dependent oxidoreductase family protein; [D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division.
       0.416
AQM60031.1
ABC transporter family protein; [P] COG1122 ABC-type cobalt transport system, ATPase component.
  
    0.404
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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