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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM60286.1[R] COG1040 Predicted amidophosphoribosyltransferases. (210 aa)    
Predicted Functional Partners:
AQM61259.1
Hypothetical protein.
  
  
 0.923
dprA
dprA: DNA protecting protein DprA; [LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
 
 
 0.870
nagA
nagA: N-acetylglucosamine-6-phosphate deacetylase; [G] COG1820 N-acetylglucosamine-6-phosphate deacetylase.
  
    0.821
recD2
phoH-like family protein; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
       0.763
AQM61379.1
Hypothetical protein; comEC_N-term: ComEC/Rec2-related domain protein; [R] COG0658 Predicted membrane metal-binding protein.
 
  
 0.761
NPD11_221
Sigma-54 interaction domain protein; [O] COG0606 Predicted ATPase with chaperone activity.
 
  
 0.721
AQM59365.1
Radc: DNA repair RadC family protein; [L] COG2003 DNA repair proteins; Belongs to the UPF0758 family.
 
    0.705
NPD11_220
Conserved hypothetical protein; [L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family.
 
    0.684
AQM60860.1
UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain protein; [E] COG0287 Prephenate dehydrogenase.
   
  
 0.676
AQM59238.1
[R] COG0457 FOG: TPR repeat.
  
  
 0.627
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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