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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59221.1mreB: cell shape determining, MreB/Mrl family protein; [D] COG1077 Actin-like ATPase involved in cell morphogenesis. (344 aa)    
Predicted Functional Partners:
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.957
mrdB
rodA_shape: rod shape-determining protein RodA; [D] COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 
 0.848
AQM58647.1
[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.831
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.782
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
  
 0.656
spoIIID
spore_III_D: sporulation transcriptional regulator SpoIIID.
       0.653
ftsW
ftsW: cell division protein FtsW; [D] COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 
 0.632
mreD
shape_MreD: rod shape-determining protein MreD.
  
  
 0.610
AQM60204.1
Peptidase M23 family protein; [M] COG0739 Membrane proteins related to metalloendopeptidases.
       0.558
AQM58724.1
[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.552
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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