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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59511.1[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (340 aa)    
Predicted Functional Partners:
tsaD
tRNA threonylcarbamoyl adenosine modification protein TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
     
 0.815
AQM59544.1
Endodeoxyribonuclease RusA family protein.
 
     0.780
AQM60124.1
Hypothetical protein.
 
     0.714
AQM59686.1
Glucose / Sorbosone dehydrogenase family protein.
 
     0.692
AQM61368.1
Ribosomal RNA adenine dimethylase family protein.
  
   
 0.691
NPD11_977
3'-5' exonuclease family protein; [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
 
   0.679
AQM59642.1
Peptidase M28 family protein; [R] COG2234 Predicted aminopeptidases.
 
  
 0.638
AQM60189.1
GDSL-like Lipase/Acylhydrolase family protein; [E] COG2755 Lysophospholipase L1 and related esterases.
 
  
 0.629
AQM60048.1
Conserved hypothetical protein; [J] COG2868 Predicted ribosomal protein.
  
     0.623
AQM60885.1
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.
  
 0.604
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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