STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59340.1Hypothetical protein. (160 aa)    
Predicted Functional Partners:
AQM59693.1
Hypothetical protein.
  
     0.721
plc
Phospholipase C.
  
     0.708
AQM60489.1
Conserved hypothetical protein; [S] COG1289 Predicted membrane protein.
 
     0.598
yokD
SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein yokD; [V] COG2746 Aminoglycoside N3'-acetyltransferase.
 
     0.593
NPD11_633
Pentapeptide repeats family protein; [S] COG1357 Uncharacterized low-complexity proteins.
 
     0.586
NPD11_335
Hypothetical protein.
  
     0.581
AQM59649.1
mgtC family protein; [S] COG1285 Uncharacterized membrane protein.
  
  
 0.580
AQM60049.1
mgtC family protein; [S] COG1285 Uncharacterized membrane protein.
  
  
 0.580
NPD11_643
Accessory gene regulator B family protein; [OTK] COG4512 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide.
  
  
 0.575
NPD11_956
Hypothetical protein.
  
     0.572
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.