STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM60898.1Zinc dependent phospholipase C family protein. (192 aa)    
Predicted Functional Partners:
NPD11_490
Hypothetical protein.
  
     0.701
NPD11_548
Iron Transport-associated domain protein.
  
     0.610
cadA
ATPase-IB2_Cd: cadmium-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
       0.520
AQM59391.1
[T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
     0.498
NPD11_353
Conserved hypothetical protein; [S] COG4086 Predicted secreted protein.
  
     0.495
AQM61213.1
Mannose-6-phosphate isomerase family protein; [M] COG0836 Mannose-1-phosphate guanylyltransferase.
       0.490
NPD11_329
Hypothetical protein.
  
     0.472
AQM60457.1
Bacterial regulatory, arsR family protein; [K] COG0640 Predicted transcriptional regulators.
       0.454
AQM58869.1
Putative membrane protein.
  
     0.453
AQM60571.1
Insertion element domain protein; [L] COG3677 Transposase and inactivated derivatives.
  
     0.434
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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