STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59408.1Nitrite and sulphite reductase 4Fe-4S domain protein; [P] COG0155 Sulfite reductase, beta subunit (hemoprotein). (516 aa)    
Predicted Functional Partners:
cobA
cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase; [H] COG0007 Uroporphyrinogen-III methylase.
 
  
 0.954
AQM59356.1
Molybdopterin oxidoreductase family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.940
AQM60451.1
Glutamine synthetase, catalytic domain protein; [E] COG0174 Glutamine synthetase.
  
  
 0.931
AQM58668.1
glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; [E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.919
AQM58865.1
Dihydroorotate dehydrogenase family protein; [R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
     
  0.900
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
  0.900
hcp-2
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
  0.900
hcp-3
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
  0.900
AQM60292.1
Nitrite and sulphite reductase 4Fe-4S domain protein; [C] COG1251 NAD(P)H-nitrite reductase.
 
   
 0.716
NPD11_804
Nitrite and sulphite reductase 4Fe-4S domain protein; [C] COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits.
 
   
 0.669
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.