STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM60705.1Heavy-metal-associated domain protein; [P] COG2608 Copper chaperone. (67 aa)    
Predicted Functional Partners:
AQM60476.1
Hypothetical protein; PSP1 C-terminal conserved region family protein; [S] COG1774 Uncharacterized homolog of PSP1.
       0.825
AQM58986.1
ATPase associated with various cellular activities family protein; [L] COG2812 DNA polymerase III, gamma/tau subunits.
       0.825
AQM60047.1
Conserved hypothetical protein; [S] COG3870 Uncharacterized protein conserved in bacteria.
  
    0.792
AQM59158.1
[F] COG0125 Thymidylate kinase.
       0.652
fer
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
    0.545
AQM59394.1
Heavy-metal-associated domain protein; [P] COG2608 Copper chaperone.
  
 
 0.529
AQM58698.1
ATPase-IB1_Cu: copper-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
  
 
 0.529
cadA
ATPase-IB2_Cd: cadmium-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
  
 
 0.529
AQM59566.1
Heavy-metal-associated domain protein.
  
 
 0.529
AQM60218.1
Putative amidohydrolase; [R] COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase.
       0.481
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.